Browse of TCMCG007C05900 protein

CDS

Accession Number	TCMCG007C05900
gbkey	CDS
Protein Id	XP_009132470.1
Location	join(5402148..5402399,5402487..5402512,5402623..5403514,5403729..5403763,5403871..5403970,5404173..5404277,5404361..5404480,5404582..5404672,5404772..5404953,5405061..5405126,5405208..5405456,5405627..5405685,5405755..5405821,5405943..5406272,5406353..5406421,5406514..5406600,5406684..5406771,5406875..5406993,5407061..5407165,5407313..5407356,5407434..5407503,5407578..5407681,5407786..5407951)
Gene	LOC103857074
GeneID	103857074
Organism	Brassica rapa

Protein

Length	1141aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009134222.3
Definition	DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	B
Description	C-5 cytosine-specific DNA methylase
KEGG_TC	-
KEGG_Module	M00035        [VIEW IN KEGG]
KEGG_Reaction	R04858        [VIEW IN KEGG]
KEGG_rclass	RC00003        [VIEW IN KEGG] RC00332        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko02048        [VIEW IN KEGG] ko03032        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K00558        [VIEW IN KEGG]
EC	2.1.1.37        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00270        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko05206        [VIEW IN KEGG] map00270        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map05206        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006304        [VIEW IN EMBL-EBI] GO:0006305        [VIEW IN EMBL-EBI] GO:0006306        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008168        [VIEW IN EMBL-EBI] GO:0008757        [VIEW IN EMBL-EBI] GO:0009008        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009408        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010426        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0016741        [VIEW IN EMBL-EBI] GO:0032259        [VIEW IN EMBL-EBI] GO:0032776        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034605        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0043414        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044728        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090116        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTATCTCCGGCGAAATGTGAGTCAGAAGACCCCACAGCTCAGCTGGATCTCCTCCTCTCTTCTCCTAGATCCGAACCCCAACGCCTCTCTCTCCTCCTCTCTCTTCCCAATCCCGCCGAAGCAGAGATGAGCACGAGCAGGAGATCCACGAGGATCAATTGTAATTCGCCTAAAGAGATTGGCGGAGGAGAAGGTACCAACGGAAAGTCTGGATCGAGTAAGAGAAAGATTAGTAGCGCTCCGGTTAAGAAAGATTCTGGCGGATTGTCATTCGAAGACATAGCCAAGAGCTTGGAGATTGGAGTCGTTTCCGAGTGCCGAGATAAGAACGATGATGCTGAAGGTAGATCGCAAGTTCCGGCTAAGAGGAAAGTTGACTGTGATGACATGAAGCGTTCTAGCAGTAATAAACGGACGAGGAGATCTGCGAGATTCAGTAAAGGGATGGAGGATGAGGGAGAAGAAAATCTAGGCGAGGAGCCTGTTCCATCCATTAGATCTCCAAGGCTATCTGGAACTGTTGAAAATGGTTTGGGATTATGTGGTGCAAAACAGGTGAGAGGAACTGAGAAGCTGGTGCAAGTTAGTGAGAATGGTAACTCGAAGAAATGTGAGGGTGATGGCTTTGTTTCATCTAAGCAAGAGCTATTAGGGTCAACTGTAAATGGTAGTAGGGTCAAGTCGTTAGGAAAACACAGATCTTCTGACCCAAATGCGAGTGGTGATCACACTAGCTCTTTGAAAATTAGTGAAAATGGTACGAGTCGCCGAGTGGTGATGACAGCTGCGTTAGTGGAACAAGAGTCACGTCAGAGTAGAACTAGTGACTGCGGTGCTGATGCTACTGTGATCTATATCTCTGACGACGATGAAGAGCCGCCGCCAGCCAAGGACGTACAAGATTCGGTTGAATTTTTGTATACGAAAAGCTCTAATGGAGATGTTTTGATACAAGGTGCAAGTGGATGTACCCTCTCCTCGGGGGGAAATGGGAGACAAGCACCACTGGATCAAAATAGTCCAATTAAATCAACCAAGGGAAAGGGTGCGCGAGTGACCCGTACTGCTGTCCGTGAAAAGCATGAACATGGTTCCTCCTTTTTCATTGGAGAGCCAATTCCTTGCGAGGAGGCTAAAGAAAGATGGCGCTGGAGATATGACCTCAAGGAGCACAAATCTAAGAGGAGAGGCCAACAGGCAGAAGATGACGAAGACATGATTGTTGCAAATGTGGAATGCCACTATTCACAGGCAAAAGTCGACAATGAAACGTTCAGCCTCGGAGACTTTGCCTGCCTAATGGGTAATGGAGAAGAGCCACCTATCGGCAAGATAGTAGAGTTTTTTAAGACAACAGATGGAGAAAGCTACTTCCGAGTTCAGTGGTTGTACAGAGCAACGGATACAGTAATGCAGAAGCAGGCTGCTGATCATGAGAGAAGGCGTCTCTTCTACTCTACTGTAATGAATGATAATCCAATAGATTGTCTTATTTCTAAAGTTACTGTTTTACAAGTATCACCTAGGGCAGGATTAAATCCCAATTCTATAAAATCTGACTTTTATTTTGATATGGAGTACTGCGTGGAGTTTTCGACATTTCAAACCTTGAGAACTCAAACTTCCGAAAACAAGCTTGAGTGTGGTGCCGATGTGACACCTACAGAATCCATTGAATCTATTTTGGAAGATAAAAGTTTTAGCAAAGAGCTTCTGGTGCTTGATCTTTACAGTGGTTGTGGTGGAATGTCCACTGGGTTAAATCTTGGAGCCAAGATTTCTGGAGTTGATGTCGTGACGAAATGGGCTATTGACCAGAACTTGGCTGCCTGTGAGAGCTTGAAACTGAACCATCCACAGACGCAGGTTAGGAATGACTCTGCTGGAGATTTCCTCCAACTTTTGAAGGAGTGGGGTAAATTATGCAAGCGCTATGTGCGTAACAATGGTCATACAACTGATACATTAAACCCCGAAAATTCAACAAAAGAAGCCACTGAAAGTAGCTCTTCTACTGAAGATGATTCAGAACCTGAGGAGTACGAAGTTGAAAAGCTGGTTGATATATGCTATGGTGATCCTGACAAGACAGGAGAACGTGGCCTGAAGTTTAAGGTGCACTGGAAAGGATATAGCAGCAACGAAGATACTTGGGAGCCAGCAGAGGAATTGAGCAATTGTCAAGATGCCATCCGGGAGTTTGTAACAAGTGGATTCAAGAAGAAGATCTTGCCACTTCCTGGCGGTGTTGGCGTGATATGTGGTGGACCTCCATGTCAAGGAATTAGTGGCTATAACCGCTTCAGGGAAGTTGATTCTCCGTTGACTGATGAAAGGAATCAGCAAATTGTAGTTTTCATGGACATAGTTGAGTATCTGAAACCCAAATTCGTGTTGATGGAAAACGTTGTTGATATTCTGCGTTTGGACAAAGGTTCTCTTGGGAGGTACGCTTTGAGCCGTCTTGTGGACATGAGATACCAAGCGAGGCTAGGTATCATAACAGCTGGTTGCTATGGTCTTTCCCAATTTCGTTCCCGAGTTTTCATGTGGGGAGCTGATCCAAACATGAAACTGCCTCCGTTTCCGCTTCCAACCCATGATGTTATTGTCAGATATGGGTTTCCTCTTGAGTTCGAGCGGAATGTAGTTGCTTACTGTGAAGGCCAGCCCAGAGATGTTGAAACAGCTCTTGTTCTAAAAGATGCGATATCAGATCTTCCTCATGTGTCAAACAACGAAACCCGGGAAAGAATGTCCTATGAAAGTCTCCCAGAGACAGATTTCCAGAGATACATTAGATCAACCAAACACGATATGACTGGCTCTGCGACTGATAACTGTACAAAAAGGACGATGCTACTGTATGATCACAGGCCGTCCCTTTTGTCTGAAGATGATTATAACCGAGTCTGTCAAATCCCAAAGAAGAAGGGAGCTAATTTCAGGGATCTTCCAGGGTTAATCGTCAGAAACGACAATACAGTCGGCCGTGATCCATCAATGGAACCTGTCCTTCTGCCATCAGGAAAGCGTTTGGTACCAGAATATGTCTTTACTTTTCAGCAAGGGAAATCTAAAAGACCGTTTGCGCGTCTTTGGTGGGACGAAACAGTTCCAACCGTTCTGACAGTCCCCAGCTGCAGCAATCAGGCGTTTTTGCATCCAGAGCAAGATCGAATACTAACCATAAGAGAAGCCGCACGGCTTCAAGGTTTCCCTGATTACTTCCAGTTCTGTGGAACCGTTAAACAAAGGTACTGTCAGATTGGAAATGCAGTGGCAGTCTCGGTTTCTCGTGCTTTGGGCTATTCTCTTGGTATGGCTTTCCGTGGTCTAGCCGGTGACGAGAATATGATAAAACTTCCCCAGAAGTTTTCTCATTCAAGTTACCTTCAGCTTCAAGAATCCATTCCTCACTAA

Protein:   MLSPAKCESEDPTAQLDLLLSSPRSEPQRLSLLLSLPNPAEAEMSTSRRSTRINCNSPKEIGGGEGTNGKSGSSKRKISSAPVKKDSGGLSFEDIAKSLEIGVVSECRDKNDDAEGRSQVPAKRKVDCDDMKRSSSNKRTRRSARFSKGMEDEGEENLGEEPVPSIRSPRLSGTVENGLGLCGAKQVRGTEKLVQVSENGNSKKCEGDGFVSSKQELLGSTVNGSRVKSLGKHRSSDPNASGDHTSSLKISENGTSRRVVMTAALVEQESRQSRTSDCGADATVIYISDDDEEPPPAKDVQDSVEFLYTKSSNGDVLIQGASGCTLSSGGNGRQAPLDQNSPIKSTKGKGARVTRTAVREKHEHGSSFFIGEPIPCEEAKERWRWRYDLKEHKSKRRGQQAEDDEDMIVANVECHYSQAKVDNETFSLGDFACLMGNGEEPPIGKIVEFFKTTDGESYFRVQWLYRATDTVMQKQAADHERRRLFYSTVMNDNPIDCLISKVTVLQVSPRAGLNPNSIKSDFYFDMEYCVEFSTFQTLRTQTSENKLECGADVTPTESIESILEDKSFSKELLVLDLYSGCGGMSTGLNLGAKISGVDVVTKWAIDQNLAACESLKLNHPQTQVRNDSAGDFLQLLKEWGKLCKRYVRNNGHTTDTLNPENSTKEATESSSSTEDDSEPEEYEVEKLVDICYGDPDKTGERGLKFKVHWKGYSSNEDTWEPAEELSNCQDAIREFVTSGFKKKILPLPGGVGVICGGPPCQGISGYNRFREVDSPLTDERNQQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRLVDMRYQARLGIITAGCYGLSQFRSRVFMWGADPNMKLPPFPLPTHDVIVRYGFPLEFERNVVAYCEGQPRDVETALVLKDAISDLPHVSNNETRERMSYESLPETDFQRYIRSTKHDMTGSATDNCTKRTMLLYDHRPSLLSEDDYNRVCQIPKKKGANFRDLPGLIVRNDNTVGRDPSMEPVLLPSGKRLVPEYVFTFQQGKSKRPFARLWWDETVPTVLTVPSCSNQAFLHPEQDRILTIREAARLQGFPDYFQFCGTVKQRYCQIGNAVAVSVSRALGYSLGMAFRGLAGDENMIKLPQKFSHSSYLQLQESIPH